Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Upk2P38575 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.73□□□□□ -0.69
Upk2P38575 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.73□□□□□ -0.69
Upk2P38575 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Upk2P38575 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.72□□□□□ -0.69
Upk2P38575 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Upk2P38575 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.72□□□□□ -0.69
Upk2P38575 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Upk2P38575 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Upk2P38575 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Rprl1-201ENSMUST00000158050 327 ntBASIC10.72□□□□□ -0.69
Upk2P38575 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.72□□□□□ -0.69
Upk2P38575 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.72□□□□□ -0.69
Upk2P38575 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.72□□□□□ -0.69
Upk2P38575 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.72□□□□□ -0.69
Upk2P38575 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.72□□□□□ -0.69
Upk2P38575 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Upk2P38575 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.72□□□□□ -0.69
Upk2P38575 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.72□□□□□ -0.69
Upk2P38575 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Upk2P38575 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.72□□□□□ -0.69
Upk2P38575 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Upk2P38575 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
Upk2P38575 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Upk2P38575 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.72□□□□□ -0.69
Upk2P38575 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Upk2P38575 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.72□□□□□ -0.69
Upk2P38575 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.72□□□□□ -0.69
Upk2P38575 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Upk2P38575 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Upk2P38575 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.72□□□□□ -0.69
Upk2P38575 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Upk2P38575 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Upk2P38575 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Upk2P38575 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk2P38575 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.71□□□□□ -0.69
Upk2P38575 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk2P38575 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk2P38575 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Upk2P38575 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.71□□□□□ -0.69
Upk2P38575 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Upk2P38575 Gm11222-201ENSMUST00000119005 738 ntBASIC10.71□□□□□ -0.69
Upk2P38575 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.71□□□□□ -0.69
Upk2P38575 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.71□□□□□ -0.69
Upk2P38575 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Upk2P38575 Gm27501-201ENSMUST00000183599 107 ntBASIC10.71□□□□□ -0.69
Upk2P38575 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.71□□□□□ -0.69
Upk2P38575 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Upk2P38575 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.71□□□□□ -0.69
Upk2P38575 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk2P38575 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk2P38575 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.71□□□□□ -0.69
Upk2P38575 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.71□□□□□ -0.69
Upk2P38575 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.71□□□□□ -0.69
Upk2P38575 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.71□□□□□ -0.69
Upk2P38575 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.71□□□□□ -0.69
Upk2P38575 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.71□□□□□ -0.69
Upk2P38575 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk2P38575 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk2P38575 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.71□□□□□ -0.69
Upk2P38575 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk2P38575 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk2P38575 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Upk2P38575 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.71□□□□□ -0.7
Upk2P38575 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.71□□□□□ -0.7
Upk2P38575 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Upk2P38575 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Upk2P38575 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Upk2P38575 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Upk2P38575 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
Upk2P38575 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
Upk2P38575 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Upk2P38575 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.71□□□□□ -0.7
Upk2P38575 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Upk2P38575 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Upk2P38575 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.71□□□□□ -0.7
Upk2P38575 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Upk2P38575 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Upk2P38575 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Upk2P38575 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms