Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
VtnP29788 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VtnP29788 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VtnP29788 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VtnP29788 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
VtnP29788 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.12□□□□□ -0.63
VtnP29788 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VtnP29788 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VtnP29788 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.11□□□□□ -0.63
VtnP29788 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.11□□□□□ -0.63
VtnP29788 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
VtnP29788 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.11□□□□□ -0.63
VtnP29788 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
VtnP29788 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Gm38317-201ENSMUST00000195564 343 ntBASIC11.11□□□□□ -0.63
VtnP29788 Gm3786-201ENSMUST00000202659 378 ntBASIC11.11□□□□□ -0.63
VtnP29788 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.11□□□□□ -0.63
VtnP29788 Gm44124-201ENSMUST00000204159 472 ntBASIC11.11□□□□□ -0.63
VtnP29788 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.11□□□□□ -0.63
VtnP29788 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.11□□□□□ -0.63
VtnP29788 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
VtnP29788 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.11□□□□□ -0.63
VtnP29788 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.11□□□□□ -0.63
VtnP29788 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.11□□□□□ -0.63
VtnP29788 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VtnP29788 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
VtnP29788 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
VtnP29788 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
VtnP29788 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
VtnP29788 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.1□□□□□ -0.63
VtnP29788 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Gm15547-201ENSMUST00000122152 333 ntBASIC11.1□□□□□ -0.63
VtnP29788 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.1□□□□□ -0.63
VtnP29788 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 AA914427-201ENSMUST00000193194 1166 ntBASIC11.1□□□□□ -0.63
VtnP29788 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.1□□□□□ -0.63
VtnP29788 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
VtnP29788 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.1□□□□□ -0.63
VtnP29788 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VtnP29788 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms