Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.29□□□□□ -0.44
RxrbP28704 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
RxrbP28704 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.29□□□□□ -0.44
RxrbP28704 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RxrbP28704 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
RxrbP28704 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RxrbP28704 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RxrbP28704 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RxrbP28704 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RxrbP28704 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.29□□□□□ -0.44
RxrbP28704 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RxrbP28704 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RxrbP28704 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RxrbP28704 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RxrbP28704 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.28□□□□□ -0.44
RxrbP28704 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RxrbP28704 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RxrbP28704 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RxrbP28704 Gm14928-201ENSMUST00000120198 477 ntBASIC12.28□□□□□ -0.44
RxrbP28704 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Gm23984-201ENSMUST00000157139 203 ntBASIC12.28□□□□□ -0.44
RxrbP28704 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Gm24196-201ENSMUST00000179161 110 ntBASIC12.28□□□□□ -0.44
RxrbP28704 Gm27892-201ENSMUST00000185017 106 ntBASIC12.28□□□□□ -0.44
RxrbP28704 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.28□□□□□ -0.44
RxrbP28704 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.28□□□□□ -0.44
RxrbP28704 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RxrbP28704 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RxrbP28704 Gm5356-201ENSMUST00000093326 615 ntBASIC12.28□□□□□ -0.44
RxrbP28704 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.28□□□□□ -0.44
RxrbP28704 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.28□□□□□ -0.44
RxrbP28704 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.28□□□□□ -0.44
RxrbP28704 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RxrbP28704 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.28□□□□□ -0.44
RxrbP28704 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RxrbP28704 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RxrbP28704 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
RxrbP28704 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RxrbP28704 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RxrbP28704 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RxrbP28704 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RxrbP28704 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RxrbP28704 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RxrbP28704 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RxrbP28704 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.27□□□□□ -0.44
RxrbP28704 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RxrbP28704 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.27□□□□□ -0.44
RxrbP28704 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
RxrbP28704 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RxrbP28704 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RxrbP28704 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RxrbP28704 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RxrbP28704 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.27□□□□□ -0.45
RxrbP28704 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RxrbP28704 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
RxrbP28704 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
RxrbP28704 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RxrbP28704 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
RxrbP28704 Gm11803-201ENSMUST00000119966 444 ntBASIC12.27□□□□□ -0.45
RxrbP28704 Gm16479-201ENSMUST00000121706 932 ntBASIC12.27□□□□□ -0.45
RxrbP28704 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RxrbP28704 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.27□□□□□ -0.45
RxrbP28704 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
RxrbP28704 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RxrbP28704 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RxrbP28704 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms