Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.74□□□□□ -0.37
H2afxP27661 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.74□□□□□ -0.37
H2afxP27661 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afxP27661 Gm7775-201ENSMUST00000218871 853 ntBASIC12.74□□□□□ -0.37
H2afxP27661 Itm2b-204ENSMUST00000228637 783 ntBASIC12.74□□□□□ -0.37
H2afxP27661 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afxP27661 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afxP27661 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afxP27661 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afxP27661 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afxP27661 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afxP27661 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
H2afxP27661 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afxP27661 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
H2afxP27661 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
H2afxP27661 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afxP27661 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afxP27661 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afxP27661 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afxP27661 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afxP27661 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
H2afxP27661 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
H2afxP27661 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.73□□□□□ -0.37
H2afxP27661 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
H2afxP27661 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.73□□□□□ -0.37
H2afxP27661 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.73□□□□□ -0.37
H2afxP27661 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.73□□□□□ -0.37
H2afxP27661 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
H2afxP27661 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.73□□□□□ -0.37
H2afxP27661 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
H2afxP27661 Snord83b-201ENSMUST00000104546 94 ntBASIC12.73□□□□□ -0.37
H2afxP27661 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.73□□□□□ -0.37
H2afxP27661 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Gm23119-201ENSMUST00000158610 140 ntBASIC12.73□□□□□ -0.37
H2afxP27661 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.73□□□□□ -0.37
H2afxP27661 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.73□□□□□ -0.37
H2afxP27661 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.73□□□□□ -0.37
H2afxP27661 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
H2afxP27661 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
H2afxP27661 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afxP27661 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.72□□□□□ -0.37
H2afxP27661 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.72□□□□□ -0.37
H2afxP27661 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
H2afxP27661 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
H2afxP27661 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.72□□□□□ -0.37
H2afxP27661 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.72□□□□□ -0.37
H2afxP27661 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
H2afxP27661 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Gm43002-201ENSMUST00000200310 155 ntBASIC12.72□□□□□ -0.37
H2afxP27661 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.72□□□□□ -0.37
H2afxP27661 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
H2afxP27661 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
H2afxP27661 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.72□□□□□ -0.37
H2afxP27661 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
H2afxP27661 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afxP27661 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
H2afxP27661 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms