Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hoxd8P23463 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hoxd8P23463 Gm13183-201ENSMUST00000118615 789 ntBASIC12.64□□□□□ -0.39
Hoxd8P23463 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Gm22144-201ENSMUST00000157402 102 ntBASIC12.64□□□□□ -0.39
Hoxd8P23463 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Gm42779-201ENSMUST00000198807 406 ntBASIC12.64□□□□□ -0.39
Hoxd8P23463 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Gm45398-201ENSMUST00000210561 165 ntBASIC12.64□□□□□ -0.39
Hoxd8P23463 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.64□□□□□ -0.39
Hoxd8P23463 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.64□□□□□ -0.39
Hoxd8P23463 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxd8P23463 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxd8P23463 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxd8P23463 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxd8P23463 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.63□□□□□ -0.39
Hoxd8P23463 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hoxd8P23463 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Hoxd8P23463 Gm22711-201ENSMUST00000116890 133 ntBASIC12.63□□□□□ -0.39
Hoxd8P23463 Gm12029-201ENSMUST00000120073 832 ntBASIC12.63□□□□□ -0.39
Hoxd8P23463 Gm14460-201ENSMUST00000121511 639 ntBASIC12.63□□□□□ -0.39
Hoxd8P23463 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Hoxd8P23463 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxd8P23463 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.63□□□□□ -0.39
Hoxd8P23463 Gm29155-201ENSMUST00000185910 269 ntBASIC12.63□□□□□ -0.39
Hoxd8P23463 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Hoxd8P23463 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.63□□□□□ -0.39
Hoxd8P23463 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.63□□□□□ -0.39
Hoxd8P23463 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Hoxd8P23463 Gm7600-201ENSMUST00000209657 785 ntBASIC12.63□□□□□ -0.39
Hoxd8P23463 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxd8P23463 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxd8P23463 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxd8P23463 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.63□□□□□ -0.39
Hoxd8P23463 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.63□□□□□ -0.39
Hoxd8P23463 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxd8P23463 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxd8P23463 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.63□□□□□ -0.39
Hoxd8P23463 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hoxd8P23463 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxd8P23463 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxd8P23463 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms