Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pde6bP23440 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pde6bP23440 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pde6bP23440 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pde6bP23440 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pde6bP23440 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.41□□□□□ -0.26
Pde6bP23440 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.41□□□□□ -0.26
Pde6bP23440 Gm22334-201ENSMUST00000158070 133 ntBASIC13.41□□□□□ -0.26
Pde6bP23440 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.41□□□□□ -0.26
Pde6bP23440 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.41□□□□□ -0.26
Pde6bP23440 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pde6bP23440 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pde6bP23440 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.41□□□□□ -0.26
Pde6bP23440 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pde6bP23440 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.41□□□□□ -0.26
Pde6bP23440 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.41□□□□□ -0.26
Pde6bP23440 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pde6bP23440 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pde6bP23440 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pde6bP23440 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pde6bP23440 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pde6bP23440 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.41□□□□□ -0.26
Pde6bP23440 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pde6bP23440 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.41□□□□□ -0.26
Pde6bP23440 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Pde6bP23440 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pde6bP23440 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.41□□□□□ -0.26
Pde6bP23440 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pde6bP23440 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.41□□□□□ -0.26
Pde6bP23440 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pde6bP23440 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pde6bP23440 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.4□□□□□ -0.26
Pde6bP23440 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pde6bP23440 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pde6bP23440 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.4□□□□□ -0.26
Pde6bP23440 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.4□□□□□ -0.26
Pde6bP23440 Gm20426-201ENSMUST00000173657 440 ntBASIC13.4□□□□□ -0.26
Pde6bP23440 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.4□□□□□ -0.26
Pde6bP23440 Gm37666-201ENSMUST00000194110 866 ntBASIC13.4□□□□□ -0.26
Pde6bP23440 Gm42937-201ENSMUST00000197360 752 ntBASIC13.4□□□□□ -0.26
Pde6bP23440 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pde6bP23440 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pde6bP23440 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pde6bP23440 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC13.4□□□□□ -0.26
Pde6bP23440 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pde6bP23440 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pde6bP23440 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pde6bP23440 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pde6bP23440 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pde6bP23440 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pde6bP23440 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.4□□□□□ -0.26
Pde6bP23440 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pde6bP23440 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.39□□□□□ -0.27
Pde6bP23440 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.39□□□□□ -0.27
Pde6bP23440 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pde6bP23440 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pde6bP23440 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Pde6bP23440 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.39□□□□□ -0.27
Pde6bP23440 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.39□□□□□ -0.27
Pde6bP23440 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Pde6bP23440 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.39□□□□□ -0.27
Pde6bP23440 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.39□□□□□ -0.27
Pde6bP23440 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.39□□□□□ -0.27
Pde6bP23440 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.39□□□□□ -0.27
Pde6bP23440 AY036118-201ENSMUST00000200021 923 ntBASIC13.39□□□□□ -0.27
Pde6bP23440 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.39□□□□□ -0.27
Pde6bP23440 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.39□□□□□ -0.27
Pde6bP23440 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.39□□□□□ -0.27
Pde6bP23440 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.39□□□□□ -0.27
Pde6bP23440 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pde6bP23440 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.39□□□□□ -0.27
Pde6bP23440 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pde6bP23440 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pde6bP23440 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6bP23440 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.39□□□□□ -0.27
Pde6bP23440 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.39□□□□□ -0.27
Pde6bP23440 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.39□□□□□ -0.27
Pde6bP23440 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms