Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.18□□□□□ -0.62
Hmgn1P18608 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hmgn1P18608 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Hmgn1P18608 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.18□□□□□ -0.62
Hmgn1P18608 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Hmgn1P18608 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.18□□□□□ -0.62
Hmgn1P18608 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.18□□□□□ -0.62
Hmgn1P18608 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.18□□□□□ -0.62
Hmgn1P18608 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Gm45930-201ENSMUST00000221330 292 ntBASIC11.18□□□□□ -0.62
Hmgn1P18608 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.18□□□□□ -0.62
Hmgn1P18608 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Hmgn1P18608 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Hmgn1P18608 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hmgn1P18608 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.18□□□□□ -0.62
Hmgn1P18608 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn1P18608 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.17□□□□□ -0.62
Hmgn1P18608 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.17□□□□□ -0.62
Hmgn1P18608 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hmgn1P18608 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hmgn1P18608 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Gm24830-201ENSMUST00000102024 166 ntBASIC11.17□□□□□ -0.62
Hmgn1P18608 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.17□□□□□ -0.62
Hmgn1P18608 Gm4271-201ENSMUST00000174444 973 ntBASIC11.17□□□□□ -0.62
Hmgn1P18608 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.17□□□□□ -0.62
Hmgn1P18608 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.17□□□□□ -0.62
Hmgn1P18608 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.17□□□□□ -0.62
Hmgn1P18608 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Hmgn1P18608 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Gm26232-201ENSMUST00000083360 166 ntBASIC11.17□□□□□ -0.62
Hmgn1P18608 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.17□□□□□ -0.62
Hmgn1P18608 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.17□□□□□ -0.62
Hmgn1P18608 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hmgn1P18608 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.17□□□□□ -0.62
Hmgn1P18608 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn1P18608 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn1P18608 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn1P18608 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn1P18608 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn1P18608 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn1P18608 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.16□□□□□ -0.62
Hmgn1P18608 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hmgn1P18608 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn1P18608 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn1P18608 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.16□□□□□ -0.62
Hmgn1P18608 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Hmgn1P18608 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn1P18608 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn1P18608 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.16□□□□□ -0.62
Hmgn1P18608 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.16□□□□□ -0.62
Hmgn1P18608 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn1P18608 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn1P18608 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms