Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl1P10146 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ccl1P10146 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl1P10146 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl1P10146 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Ccl1P10146 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl1P10146 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl1P10146 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl1P10146 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl1P10146 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ccl1P10146 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.46□□□□□ -0.9
Ccl1P10146 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ccl1P10146 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.45□□□□□ -0.9
Ccl1P10146 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Gm22175-201ENSMUST00000175007 78 ntBASIC9.45□□□□□ -0.9
Ccl1P10146 Gm23363-201ENSMUST00000175024 79 ntBASIC9.45□□□□□ -0.9
Ccl1P10146 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC9.45□□□□□ -0.9
Ccl1P10146 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC9.45□□□□□ -0.9
Ccl1P10146 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC9.45□□□□□ -0.9
Ccl1P10146 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC9.45□□□□□ -0.9
Ccl1P10146 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC9.45□□□□□ -0.9
Ccl1P10146 Gm20445-201ENSMUST00000061905 565 ntBASIC9.45□□□□□ -0.9
Ccl1P10146 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Ccl1P10146 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.45□□□□□ -0.9
Ccl1P10146 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Ccl1P10146 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC9.45□□□□□ -0.9
Ccl1P10146 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Ccl1P10146 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ccl1P10146 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ccl1P10146 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl1P10146 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ccl1P10146 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Ccl1P10146 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ccl1P10146 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ccl1P10146 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.44□□□□□ -0.9
Ccl1P10146 Gm12384-201ENSMUST00000119228 919 ntBASIC9.44□□□□□ -0.9
Ccl1P10146 Gm14704-201ENSMUST00000120300 874 ntBASIC9.44□□□□□ -0.9
Ccl1P10146 Gm14822-201ENSMUST00000122247 291 ntBASIC9.44□□□□□ -0.9
Ccl1P10146 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC9.44□□□□□ -0.9
Ccl1P10146 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC9.44□□□□□ -0.9
Ccl1P10146 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC9.44□□□□□ -0.9
Ccl1P10146 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Gm24513-201ENSMUST00000174964 138 ntBASIC9.44□□□□□ -0.9
Ccl1P10146 Gm27397-201ENSMUST00000184997 107 ntBASIC9.44□□□□□ -0.9
Ccl1P10146 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ccl1P10146 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ccl1P10146 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.44□□□□□ -0.9
Ccl1P10146 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC9.44□□□□□ -0.9
Ccl1P10146 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC9.44□□□□□ -0.9
Ccl1P10146 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC9.44□□□□□ -0.9
Ccl1P10146 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Chchd1-203ENSMUST00000224633 557 ntBASIC9.44□□□□□ -0.9
Ccl1P10146 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.44□□□□□ -0.9
Ccl1P10146 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.44□□□□□ -0.9
Ccl1P10146 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl1P10146 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ccl1P10146 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Ccl1P10146 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms