Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm11531-201ENSMUST00000117614 555 ntBASIC13.35□□□□□ -0.27
Chmp6P0C0A3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Gm38341-201ENSMUST00000195357 515 ntBASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp6P0C0A3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Gm14999-201ENSMUST00000121039 624 ntBASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.34□□□□□ -0.27
Chmp6P0C0A3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Gm5950-201ENSMUST00000213337 772 ntBASIC13.34□□□□□ -0.27
Chmp6P0C0A3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.34□□□□□ -0.27
Chmp6P0C0A3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Gm10076-201ENSMUST00000073238 384 ntBASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp6P0C0A3 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.33□□□□□ -0.27
Chmp6P0C0A3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp6P0C0A3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp6P0C0A3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp6P0C0A3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Gm25043-201ENSMUST00000158604 212 ntBASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Chmp6P0C0A3 Gm9022-201ENSMUST00000182482 992 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms