Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.78■□□□□ 0.12
Hoxc9P09633 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hoxc9P09633 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hoxc9P09633 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxc9P09633 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Hoxc9P09633 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxc9P09633 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC15.77■□□□□ 0.12
Hoxc9P09633 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxc9P09633 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Hoxc9P09633 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Hoxc9P09633 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxc9P09633 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxc9P09633 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxc9P09633 Gm24844-201ENSMUST00000158679 127 ntBASIC15.77■□□□□ 0.12
Hoxc9P09633 Gm9358-201ENSMUST00000183067 927 ntBASIC15.77■□□□□ 0.12
Hoxc9P09633 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxc9P09633 Ighv5-11-201ENSMUST00000193354 371 ntBASIC15.77■□□□□ 0.12
Hoxc9P09633 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxc9P09633 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hoxc9P09633 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hoxc9P09633 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.77■□□□□ 0.11
Hoxc9P09633 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Hoxc9P09633 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hoxc9P09633 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Hoxc9P09633 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.11
Hoxc9P09633 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hoxc9P09633 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Hoxc9P09633 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Gm5380-201ENSMUST00000119296 2136 ntBASIC15.76■□□□□ 0.11
Hoxc9P09633 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Hoxc9P09633 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Gm11451-201ENSMUST00000118946 630 ntBASIC15.76■□□□□ 0.11
Hoxc9P09633 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC15.76■□□□□ 0.11
Hoxc9P09633 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC15.76■□□□□ 0.11
Hoxc9P09633 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC15.76■□□□□ 0.11
Hoxc9P09633 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC15.76■□□□□ 0.11
Hoxc9P09633 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC15.76■□□□□ 0.11
Hoxc9P09633 Gm6485-201ENSMUST00000160676 439 ntBASIC15.76■□□□□ 0.11
Hoxc9P09633 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
Hoxc9P09633 Gm21092-201ENSMUST00000178995 955 ntBASIC15.76■□□□□ 0.11
Hoxc9P09633 Mir6958-201ENSMUST00000184207 73 ntBASIC15.76■□□□□ 0.11
Hoxc9P09633 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC15.76■□□□□ 0.11
Hoxc9P09633 Gm44329-201ENSMUST00000197469 112 ntBASIC15.76■□□□□ 0.11
Hoxc9P09633 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC15.76■□□□□ 0.11
Hoxc9P09633 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC15.76■□□□□ 0.11
Hoxc9P09633 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Gm6430-201ENSMUST00000054664 1248 ntBASIC15.76■□□□□ 0.11
Hoxc9P09633 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.76■□□□□ 0.11
Hoxc9P09633 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Hoxc9P09633 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.76■□□□□ 0.11
Hoxc9P09633 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
Hoxc9P09633 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc9P09633 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Hoxc9P09633 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Hoxc9P09633 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.75■□□□□ 0.11
Hoxc9P09633 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.75■□□□□ 0.11
Hoxc9P09633 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC15.75■□□□□ 0.11
Hoxc9P09633 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC15.75■□□□□ 0.11
Hoxc9P09633 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Gm37458-201ENSMUST00000194055 410 ntBASIC15.75■□□□□ 0.11
Hoxc9P09633 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC15.75■□□□□ 0.11
Hoxc9P09633 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms