Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NclP09405 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
NclP09405 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC18.15■□□□□ 0.5
NclP09405 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC18.15■□□□□ 0.5
NclP09405 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NclP09405 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NclP09405 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC18.14■□□□□ 0.5
NclP09405 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
NclP09405 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
NclP09405 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NclP09405 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC18.14■□□□□ 0.49
NclP09405 Gm23912-201ENSMUST00000104687 87 ntBASIC18.14■□□□□ 0.49
NclP09405 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC18.14■□□□□ 0.49
NclP09405 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NclP09405 Mir7677-201ENSMUST00000184226 67 ntBASIC18.14■□□□□ 0.49
NclP09405 Ighv4-2-201ENSMUST00000192975 362 ntBASIC18.14■□□□□ 0.49
NclP09405 CT571245.2-201ENSMUST00000218421 305 ntBASIC18.14■□□□□ 0.49
NclP09405 Gm270-201ENSMUST00000223010 976 ntBASIC18.14■□□□□ 0.49
NclP09405 AC131330.1-201ENSMUST00000227814 1015 ntBASIC18.14■□□□□ 0.49
NclP09405 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
NclP09405 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC18.14■□□□□ 0.49
NclP09405 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NclP09405 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NclP09405 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC18.14■□□□□ 0.49
NclP09405 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NclP09405 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NclP09405 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NclP09405 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NclP09405 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC18.13■□□□□ 0.49
NclP09405 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NclP09405 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NclP09405 AC123834.1-201ENSMUST00000225346 2043 ntBASIC18.13■□□□□ 0.49
NclP09405 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NclP09405 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NclP09405 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NclP09405 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NclP09405 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC18.13■□□□□ 0.49
NclP09405 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NclP09405 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NclP09405 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NclP09405 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC18.13■□□□□ 0.49
NclP09405 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC18.13■□□□□ 0.49
NclP09405 Gm37444-201ENSMUST00000193605 439 ntBASIC18.13■□□□□ 0.49
NclP09405 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC18.13■□□□□ 0.49
NclP09405 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC18.13■□□□□ 0.49
NclP09405 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC18.13■□□□□ 0.49
NclP09405 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC18.13■□□□□ 0.49
NclP09405 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC18.13■□□□□ 0.49
NclP09405 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NclP09405 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NclP09405 Gm5525-201ENSMUST00000190438 1312 ntBASIC18.13■□□□□ 0.49
NclP09405 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NclP09405 Gm18782-201ENSMUST00000209023 1399 ntBASIC18.13■□□□□ 0.49
NclP09405 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC18.13■□□□□ 0.49
NclP09405 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NclP09405 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NclP09405 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NclP09405 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NclP09405 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Gm11450-201ENSMUST00000121144 333 ntBASIC18.12■□□□□ 0.49
NclP09405 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC18.12■□□□□ 0.49
NclP09405 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC18.12■□□□□ 0.49
NclP09405 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC18.12■□□□□ 0.49
NclP09405 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NclP09405 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC18.12■□□□□ 0.49
NclP09405 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC18.12■□□□□ 0.49
NclP09405 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC18.12■□□□□ 0.49
NclP09405 AC153954.1-201ENSMUST00000216959 255 ntBASIC18.12■□□□□ 0.49
NclP09405 Olfr1347-205ENSMUST00000220413 964 ntBASIC18.12■□□□□ 0.49
NclP09405 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NclP09405 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NclP09405 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC18.12■□□□□ 0.49
NclP09405 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms