Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Hoxc8P09025 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Gm34023-201ENSMUST00000195539 217 ntBASIC12.96□□□□□ -0.33
Hoxc8P09025 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.96□□□□□ -0.33
Hoxc8P09025 Gm6450-201ENSMUST00000200896 574 ntBASIC12.96□□□□□ -0.33
Hoxc8P09025 Gm45113-201ENSMUST00000207518 165 ntBASIC12.96□□□□□ -0.33
Hoxc8P09025 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.96□□□□□ -0.33
Hoxc8P09025 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Hoxc8P09025 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Hoxc8P09025 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hoxc8P09025 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxc8P09025 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Hoxc8P09025 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Hoxc8P09025 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxc8P09025 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.95□□□□□ -0.34
Hoxc8P09025 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxc8P09025 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
Hoxc8P09025 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hoxc8P09025 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hoxc8P09025 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.95□□□□□ -0.34
Hoxc8P09025 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxc8P09025 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hoxc8P09025 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hoxc8P09025 Gm12795-201ENSMUST00000117594 539 ntBASIC12.95□□□□□ -0.34
Hoxc8P09025 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.95□□□□□ -0.34
Hoxc8P09025 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxc8P09025 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Gm28388-201ENSMUST00000186262 437 ntBASIC12.95□□□□□ -0.34
Hoxc8P09025 Gm9645-201ENSMUST00000197131 792 ntBASIC12.95□□□□□ -0.34
Hoxc8P09025 Gm44329-201ENSMUST00000197469 112 ntBASIC12.95□□□□□ -0.34
Hoxc8P09025 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxc8P09025 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.95□□□□□ -0.34
Hoxc8P09025 Gm6108-201ENSMUST00000208365 367 ntBASIC12.95□□□□□ -0.34
Hoxc8P09025 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.95□□□□□ -0.34
Hoxc8P09025 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.95□□□□□ -0.34
Hoxc8P09025 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.95□□□□□ -0.34
Hoxc8P09025 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Hoxc8P09025 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxc8P09025 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxc8P09025 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Hoxc8P09025 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.94□□□□□ -0.34
Hoxc8P09025 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hoxc8P09025 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Hoxc8P09025 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Hoxc8P09025 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxc8P09025 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxc8P09025 Gm6485-201ENSMUST00000160676 439 ntBASIC12.94□□□□□ -0.34
Hoxc8P09025 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Hoxc8P09025 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Hoxc8P09025 Gm38151-201ENSMUST00000195085 289 ntBASIC12.94□□□□□ -0.34
Hoxc8P09025 Gm44124-201ENSMUST00000204159 472 ntBASIC12.94□□□□□ -0.34
Hoxc8P09025 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxc8P09025 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxc8P09025 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.94□□□□□ -0.34
Hoxc8P09025 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxc8P09025 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms