Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
PdgfrbP05622 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
PdgfrbP05622 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
PdgfrbP05622 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
PdgfrbP05622 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
PdgfrbP05622 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.41□□□□□ -0.42
PdgfrbP05622 Gm9723-201ENSMUST00000192100 457 ntBASIC12.41□□□□□ -0.42
PdgfrbP05622 Gm19080-201ENSMUST00000196082 550 ntBASIC12.41□□□□□ -0.42
PdgfrbP05622 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.41□□□□□ -0.42
PdgfrbP05622 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.41□□□□□ -0.42
PdgfrbP05622 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.41□□□□□ -0.42
PdgfrbP05622 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.41□□□□□ -0.42
PdgfrbP05622 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.41□□□□□ -0.42
PdgfrbP05622 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PdgfrbP05622 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
PdgfrbP05622 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.4□□□□□ -0.42
PdgfrbP05622 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.4□□□□□ -0.42
PdgfrbP05622 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.4□□□□□ -0.42
PdgfrbP05622 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
PdgfrbP05622 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.4□□□□□ -0.42
PdgfrbP05622 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
PdgfrbP05622 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
PdgfrbP05622 Gm12241-201ENSMUST00000118330 726 ntBASIC12.4□□□□□ -0.42
PdgfrbP05622 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.4□□□□□ -0.42
PdgfrbP05622 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.4□□□□□ -0.42
PdgfrbP05622 Gm24845-201ENSMUST00000158034 109 ntBASIC12.4□□□□□ -0.42
PdgfrbP05622 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.4□□□□□ -0.42
PdgfrbP05622 Mir8109-201ENSMUST00000184375 117 ntBASIC12.4□□□□□ -0.42
PdgfrbP05622 Gm4034-201ENSMUST00000187674 480 ntBASIC12.4□□□□□ -0.42
PdgfrbP05622 Gm6621-201ENSMUST00000193251 772 ntBASIC12.4□□□□□ -0.42
PdgfrbP05622 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.4□□□□□ -0.42
PdgfrbP05622 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.4□□□□□ -0.42
PdgfrbP05622 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
PdgfrbP05622 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.4□□□□□ -0.42
PdgfrbP05622 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.4□□□□□ -0.42
PdgfrbP05622 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PdgfrbP05622 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.4□□□□□ -0.42
PdgfrbP05622 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
PdgfrbP05622 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
PdgfrbP05622 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.4□□□□□ -0.43
PdgfrbP05622 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
PdgfrbP05622 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
PdgfrbP05622 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
PdgfrbP05622 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PdgfrbP05622 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.39□□□□□ -0.43
PdgfrbP05622 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
PdgfrbP05622 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms