Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PrnpP04925 Gm9358-201ENSMUST00000183067 927 ntBASIC12.65□□□□□ -0.38
PrnpP04925 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.65□□□□□ -0.38
PrnpP04925 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.65□□□□□ -0.38
PrnpP04925 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrnpP04925 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
PrnpP04925 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.65□□□□□ -0.38
PrnpP04925 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
PrnpP04925 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrnpP04925 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
PrnpP04925 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
PrnpP04925 Matn2-206ENSMUST00000228570 2798 ntBASIC12.65□□□□□ -0.38
PrnpP04925 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrnpP04925 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrnpP04925 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
PrnpP04925 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
PrnpP04925 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
PrnpP04925 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
PrnpP04925 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.65□□□□□ -0.39
PrnpP04925 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
PrnpP04925 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
PrnpP04925 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.64□□□□□ -0.39
PrnpP04925 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
PrnpP04925 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.64□□□□□ -0.39
PrnpP04925 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
PrnpP04925 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.64□□□□□ -0.39
PrnpP04925 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.64□□□□□ -0.39
PrnpP04925 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Gm18893-201ENSMUST00000198416 943 ntBASIC12.64□□□□□ -0.39
PrnpP04925 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
PrnpP04925 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.64□□□□□ -0.39
PrnpP04925 Gm2517-201ENSMUST00000215651 348 ntBASIC12.64□□□□□ -0.39
PrnpP04925 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
PrnpP04925 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
PrnpP04925 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PrnpP04925 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PrnpP04925 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrnpP04925 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PrnpP04925 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
PrnpP04925 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.63□□□□□ -0.39
PrnpP04925 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrnpP04925 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
PrnpP04925 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrnpP04925 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
PrnpP04925 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.63□□□□□ -0.39
PrnpP04925 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PrnpP04925 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
PrnpP04925 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PrnpP04925 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.63□□□□□ -0.39
PrnpP04925 Gm15352-201ENSMUST00000118696 270 ntBASIC12.63□□□□□ -0.39
PrnpP04925 Gm15004-201ENSMUST00000119192 630 ntBASIC12.63□□□□□ -0.39
PrnpP04925 Gm15207-201ENSMUST00000119259 442 ntBASIC12.63□□□□□ -0.39
PrnpP04925 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.63□□□□□ -0.39
PrnpP04925 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrnpP04925 Gm8737-201ENSMUST00000122208 642 ntBASIC12.63□□□□□ -0.39
PrnpP04925 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PrnpP04925 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.63□□□□□ -0.39
PrnpP04925 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PrnpP04925 Gm4034-201ENSMUST00000187674 480 ntBASIC12.63□□□□□ -0.39
PrnpP04925 Gm29499-201ENSMUST00000189151 486 ntBASIC12.63□□□□□ -0.39
PrnpP04925 Gm28329-201ENSMUST00000191208 689 ntBASIC12.63□□□□□ -0.39
PrnpP04925 Gm29171-201ENSMUST00000191397 486 ntBASIC12.63□□□□□ -0.39
PrnpP04925 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.63□□□□□ -0.39
PrnpP04925 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.63□□□□□ -0.39
PrnpP04925 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.63□□□□□ -0.39
PrnpP04925 Gm2553-201ENSMUST00000215986 605 ntBASIC12.63□□□□□ -0.39
PrnpP04925 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PrnpP04925 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.63□□□□□ -0.39
PrnpP04925 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrnpP04925 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.63□□□□□ -0.39
PrnpP04925 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.63□□□□□ -0.39
PrnpP04925 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrnpP04925 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
PrnpP04925 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
PrnpP04925 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrnpP04925 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrnpP04925 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
PrnpP04925 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.63□□□□□ -0.39
PrnpP04925 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PrnpP04925 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PrnpP04925 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
PrnpP04925 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms