Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.22□□□□□ -0.61
P01852 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.22□□□□□ -0.61
P01852 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
P01852 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
P01852 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
P01852 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
P01852 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
P01852 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01852 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01852 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
P01852 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01852 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01852 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01852 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01852 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01852 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01852 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01852 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
P01852 Gm26083-201ENSMUST00000157904 193 ntBASIC11.21□□□□□ -0.61
P01852 Gm23119-201ENSMUST00000158610 140 ntBASIC11.21□□□□□ -0.61
P01852 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.21□□□□□ -0.61
P01852 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
P01852 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
P01852 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
P01852 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.21□□□□□ -0.61
P01852 Gm27046-201ENSMUST00000182160 463 ntBASIC11.21□□□□□ -0.61
P01852 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
P01852 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.21□□□□□ -0.61
P01852 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.21□□□□□ -0.61
P01852 Gm44958-201ENSMUST00000203734 736 ntBASIC11.21□□□□□ -0.61
P01852 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.21□□□□□ -0.61
P01852 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01852 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01852 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
P01852 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
P01852 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
P01852 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
P01852 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.21□□□□□ -0.62
P01852 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.21□□□□□ -0.62
P01852 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
P01852 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.21□□□□□ -0.62
P01852 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
P01852 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
P01852 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
P01852 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
P01852 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
P01852 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
P01852 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.2□□□□□ -0.62
P01852 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
P01852 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.2□□□□□ -0.62
P01852 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
P01852 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
P01852 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
P01852 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
P01852 Gm14109-201ENSMUST00000118814 309 ntBASIC11.2□□□□□ -0.62
P01852 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
P01852 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Gm24845-201ENSMUST00000158034 109 ntBASIC11.2□□□□□ -0.62
P01852 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.2□□□□□ -0.62
P01852 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.2□□□□□ -0.62
P01852 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Gm44124-201ENSMUST00000204159 472 ntBASIC11.2□□□□□ -0.62
P01852 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
P01852 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
P01852 Gm8712-201ENSMUST00000221090 701 ntBASIC11.2□□□□□ -0.62
P01852 Gm9257-201ENSMUST00000221254 232 ntBASIC11.2□□□□□ -0.62
P01852 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.2□□□□□ -0.62
P01852 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
P01852 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.2□□□□□ -0.62
P01852 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
P01852 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms