Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC10.9□□□□□ -0.66
Col5a1O88207 Gm25063-201ENSMUST00000104666 94 ntBASIC10.9□□□□□ -0.66
Col5a1O88207 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col5a1O88207 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.9□□□□□ -0.66
Col5a1O88207 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.9□□□□□ -0.66
Col5a1O88207 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 Gm3551-201ENSMUST00000190750 664 ntBASIC10.9□□□□□ -0.66
Col5a1O88207 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.9□□□□□ -0.66
Col5a1O88207 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col5a1O88207 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Col5a1O88207 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col5a1O88207 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Col5a1O88207 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col5a1O88207 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.9□□□□□ -0.67
Col5a1O88207 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col5a1O88207 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col5a1O88207 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col5a1O88207 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col5a1O88207 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col5a1O88207 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col5a1O88207 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col5a1O88207 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Col5a1O88207 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col5a1O88207 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Col5a1O88207 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.89□□□□□ -0.67
Col5a1O88207 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col5a1O88207 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col5a1O88207 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.89□□□□□ -0.67
Col5a1O88207 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Col5a1O88207 Gm11836-201ENSMUST00000121022 441 ntBASIC10.89□□□□□ -0.67
Col5a1O88207 Gm15566-201ENSMUST00000121130 590 ntBASIC10.89□□□□□ -0.67
Col5a1O88207 Gm45594-201ENSMUST00000211717 241 ntBASIC10.89□□□□□ -0.67
Col5a1O88207 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Col5a1O88207 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.89□□□□□ -0.67
Col5a1O88207 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.89□□□□□ -0.67
Col5a1O88207 CT030135.2-201ENSMUST00000225255 893 ntBASIC10.89□□□□□ -0.67
Col5a1O88207 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Col5a1O88207 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Col5a1O88207 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col5a1O88207 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col5a1O88207 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Col5a1O88207 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col5a1O88207 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col5a1O88207 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Col5a1O88207 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.89□□□□□ -0.67
Col5a1O88207 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col5a1O88207 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC10.89□□□□□ -0.67
Col5a1O88207 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Col5a1O88207 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.89□□□□□ -0.67
Col5a1O88207 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.89□□□□□ -0.67
Col5a1O88207 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Col5a1O88207 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.89□□□□□ -0.67
Col5a1O88207 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col5a1O88207 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col5a1O88207 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col5a1O88207 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Col5a1O88207 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Col5a1O88207 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.88□□□□□ -0.67
Col5a1O88207 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.88□□□□□ -0.67
Col5a1O88207 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.88□□□□□ -0.67
Col5a1O88207 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Col5a1O88207 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Col5a1O88207 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Col5a1O88207 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Col5a1O88207 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col5a1O88207 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col5a1O88207 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.88□□□□□ -0.67
Col5a1O88207 Gm11660-201ENSMUST00000120955 412 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 401.3 ms