Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc1a6O35544 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Slc1a6O35544 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc1a6O35544 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc1a6O35544 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc1a6O35544 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.05□□□□□ -0.48
Slc1a6O35544 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc1a6O35544 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc1a6O35544 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc1a6O35544 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.04□□□□□ -0.48
Slc1a6O35544 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.04□□□□□ -0.48
Slc1a6O35544 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Slc1a6O35544 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.04□□□□□ -0.48
Slc1a6O35544 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.04□□□□□ -0.48
Slc1a6O35544 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.04□□□□□ -0.48
Slc1a6O35544 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Slc1a6O35544 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Slc1a6O35544 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Slc1a6O35544 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Slc1a6O35544 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Slc1a6O35544 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Gm24830-201ENSMUST00000102024 166 ntBASIC12.03□□□□□ -0.48
Slc1a6O35544 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.03□□□□□ -0.48
Slc1a6O35544 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.03□□□□□ -0.48
Slc1a6O35544 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.03□□□□□ -0.48
Slc1a6O35544 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Gm7029-201ENSMUST00000173226 450 ntBASIC12.03□□□□□ -0.48
Slc1a6O35544 Mir6977-201ENSMUST00000184960 64 ntBASIC12.03□□□□□ -0.48
Slc1a6O35544 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.03□□□□□ -0.48
Slc1a6O35544 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Slc1a6O35544 Gm26232-201ENSMUST00000083360 166 ntBASIC12.03□□□□□ -0.48
Slc1a6O35544 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.03□□□□□ -0.48
Slc1a6O35544 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Slc1a6O35544 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms