Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.68□□□□□ -0.86
Efnb3O35393 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Efnb3O35393 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Efnb3O35393 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Efnb3O35393 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Efnb3O35393 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.68□□□□□ -0.86
Efnb3O35393 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC9.68□□□□□ -0.86
Efnb3O35393 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Efnb3O35393 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC9.67□□□□□ -0.86
Efnb3O35393 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC9.67□□□□□ -0.86
Efnb3O35393 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Efnb3O35393 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.67□□□□□ -0.86
Efnb3O35393 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.67□□□□□ -0.86
Efnb3O35393 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.67□□□□□ -0.86
Efnb3O35393 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Efnb3O35393 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Efnb3O35393 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.67□□□□□ -0.86
Efnb3O35393 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Snord83b-201ENSMUST00000104546 94 ntBASIC9.67□□□□□ -0.86
Efnb3O35393 Gm13612-201ENSMUST00000119276 390 ntBASIC9.67□□□□□ -0.86
Efnb3O35393 Gm11637-201ENSMUST00000120601 592 ntBASIC9.67□□□□□ -0.86
Efnb3O35393 Gm12138-201ENSMUST00000122180 951 ntBASIC9.67□□□□□ -0.86
Efnb3O35393 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC9.67□□□□□ -0.86
Efnb3O35393 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC9.67□□□□□ -0.86
Efnb3O35393 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Gm26185-201ENSMUST00000157692 266 ntBASIC9.67□□□□□ -0.86
Efnb3O35393 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Efnb3O35393 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC9.67□□□□□ -0.86
Efnb3O35393 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.67□□□□□ -0.86
Efnb3O35393 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.67□□□□□ -0.86
Efnb3O35393 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.67□□□□□ -0.86
Efnb3O35393 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Efnb3O35393 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Efnb3O35393 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Efnb3O35393 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.66□□□□□ -0.86
Efnb3O35393 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.66□□□□□ -0.86
Efnb3O35393 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Efnb3O35393 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Efnb3O35393 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC9.66□□□□□ -0.86
Efnb3O35393 Gm6244-201ENSMUST00000178732 841 ntBASIC9.66□□□□□ -0.86
Efnb3O35393 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.66□□□□□ -0.86
Efnb3O35393 Gm4034-201ENSMUST00000187674 480 ntBASIC9.66□□□□□ -0.86
Efnb3O35393 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC9.66□□□□□ -0.86
Efnb3O35393 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC9.66□□□□□ -0.86
Efnb3O35393 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC9.66□□□□□ -0.86
Efnb3O35393 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Efnb3O35393 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 144.9 ms