Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
B020004C17RikJ3QP07 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Gm3150-201ENSMUST00000166418 204 ntBASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Gm42657-201ENSMUST00000201746 211 ntBASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
B020004C17RikJ3QP07 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Gm18367-201ENSMUST00000176139 600 ntBASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Gm44158-201ENSMUST00000203881 505 ntBASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
B020004C17RikJ3QP07 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
B020004C17RikJ3QP07 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.6□□□□□ -0.23
B020004C17RikJ3QP07 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
B020004C17RikJ3QP07 Gm25076-201ENSMUST00000104098 132 ntBASIC13.6□□□□□ -0.23
B020004C17RikJ3QP07 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
B020004C17RikJ3QP07 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.6□□□□□ -0.23
B020004C17RikJ3QP07 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.6□□□□□ -0.23
B020004C17RikJ3QP07 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.6□□□□□ -0.23
B020004C17RikJ3QP07 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
B020004C17RikJ3QP07 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
B020004C17RikJ3QP07 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
B020004C17RikJ3QP07 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.6□□□□□ -0.23
B020004C17RikJ3QP07 Gm19009-201ENSMUST00000223072 823 ntBASIC13.6□□□□□ -0.23
B020004C17RikJ3QP07 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.6□□□□□ -0.23
B020004C17RikJ3QP07 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.6□□□□□ -0.23
B020004C17RikJ3QP07 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms