Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shisa8J3QNX5 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.15□□□□□ -0.63
Shisa8J3QNX5 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Shisa8J3QNX5 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Shisa8J3QNX5 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.15□□□□□ -0.63
Shisa8J3QNX5 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Shisa8J3QNX5 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.15□□□□□ -0.63
Shisa8J3QNX5 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.15□□□□□ -0.63
Shisa8J3QNX5 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shisa8J3QNX5 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Gm11637-201ENSMUST00000120601 592 ntBASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Gm11964-201ENSMUST00000120982 444 ntBASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Gm11597-201ENSMUST00000121423 964 ntBASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Gm4034-201ENSMUST00000187674 480 ntBASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Gm24136-201ENSMUST00000083374 165 ntBASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shisa8J3QNX5 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms