Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Gm13384-201ENSMUST00000117166 1344 ntBASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcf11G3X9Z4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Gm15374-201ENSMUST00000119313 844 ntBASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Mir8093-201ENSMUST00000185043 137 ntBASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 AC134869.4-202ENSMUST00000224350 837 ntBASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Gm3765-201ENSMUST00000130985 1447 ntBASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcf11G3X9Z4 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Gm8574-201ENSMUST00000203207 924 ntBASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Gm23105-201ENSMUST00000083719 134 ntBASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Gm17877-201ENSMUST00000192578 814 ntBASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Gm43058-201ENSMUST00000197645 625 ntBASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 AC153929.1-201ENSMUST00000219009 303 ntBASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcf11G3X9Z4 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Pcf11G3X9Z4 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcf11G3X9Z4 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Pcf11G3X9Z4 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Gm5100-201ENSMUST00000195631 589 ntBASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Gm5982-201ENSMUST00000196234 512 ntBASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Gm2875-201ENSMUST00000211333 360 ntBASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Gm9661-201ENSMUST00000221611 1122 ntBASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Gm19009-201ENSMUST00000223072 823 ntBASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 AC115122.1-201ENSMUST00000224850 1040 ntBASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 AC118639.2-201ENSMUST00000226289 223 ntBASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcf11G3X9Z4 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms