Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc188F6WEU2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Gm15707-201ENSMUST00000118804 996 ntBASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Gm15004-201ENSMUST00000119192 630 ntBASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Gm38007-201ENSMUST00000192187 313 ntBASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Gm44216-201ENSMUST00000203942 157 ntBASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Gm8181-201ENSMUST00000062242 669 ntBASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc188F6WEU2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm12684-201ENSMUST00000118675 999 ntBASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm9673-201ENSMUST00000119287 781 ntBASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm8384-201ENSMUST00000190905 704 ntBASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm6564-201ENSMUST00000075377 619 ntBASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm42432-201ENSMUST00000197902 1617 ntBASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc188F6WEU2 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms