Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clca3bE9PUL3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clca3bE9PUL3 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.16□□□□□ -0.3
Clca3bE9PUL3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Gm22133-201ENSMUST00000102082 109 ntBASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Gm23200-201ENSMUST00000104379 132 ntBASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Gm7857-201ENSMUST00000117957 358 ntBASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Gm5706-201ENSMUST00000181525 993 ntBASIC13.15□□□□□ -0.3
Clca3bE9PUL3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Gm27390-201ENSMUST00000184516 176 ntBASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Gm37466-201ENSMUST00000195692 652 ntBASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Gm18893-201ENSMUST00000198416 943 ntBASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clca3bE9PUL3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Gm26286-201ENSMUST00000104166 134 ntBASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Gm15711-201ENSMUST00000118889 535 ntBASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Gm14277-201ENSMUST00000121195 360 ntBASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Gm27627-201ENSMUST00000183644 150 ntBASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Clca3bE9PUL3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms