Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm15003-201ENSMUST00000118884 446 ntBASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Gm12791-201ENSMUST00000120788 655 ntBASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Gm9630-201ENSMUST00000178304 885 ntBASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hfm1D3Z4R1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Gm18294-201ENSMUST00000176980 1748 ntBASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Gm22146-201ENSMUST00000157397 288 ntBASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Gm7082-201ENSMUST00000209880 969 ntBASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hfm1D3Z4R1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Hfm1D3Z4R1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Gm11500-201ENSMUST00000118237 601 ntBASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Gm37826-201ENSMUST00000195329 322 ntBASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Gm7504-201ENSMUST00000201449 424 ntBASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Gm3433-201ENSMUST00000210149 1058 ntBASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Gm21759-201ENSMUST00000178345 1828 ntBASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hfm1D3Z4R1 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Gm11560-201ENSMUST00000117567 948 ntBASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Gm14270-201ENSMUST00000118388 846 ntBASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Gm6322-201ENSMUST00000118789 1004 ntBASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Gm12274-201ENSMUST00000120062 385 ntBASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Gm11502-201ENSMUST00000120917 1211 ntBASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC16.88■□□□□ 0.29
Hfm1D3Z4R1 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms