Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col4a6B1AVK5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Gm14807-201ENSMUST00000116640 983 ntBASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Gm18201-201ENSMUST00000174735 875 ntBASIC12.34□□□□□ -0.43
Col4a6B1AVK5 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.34□□□□□ -0.43
Col4a6B1AVK5 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col4a6B1AVK5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col4a6B1AVK5 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col4a6B1AVK5 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col4a6B1AVK5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Col4a6B1AVK5 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.33□□□□□ -0.44
Col4a6B1AVK5 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.33□□□□□ -0.44
Col4a6B1AVK5 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col4a6B1AVK5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col4a6B1AVK5 Gm37826-201ENSMUST00000195329 322 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms