Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm27023-201ENSMUST00000182372 285 ntBASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Gm10076-201ENSMUST00000073238 384 ntBASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc194A0A140LIT1 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Map1b-203ENSMUST00000223725 2669 ntBASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Gm23119-201ENSMUST00000158610 140 ntBASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Gm8602-201ENSMUST00000184045 607 ntBASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc194A0A140LIT1 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Gm3890-201ENSMUST00000182416 207 ntBASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccdc194A0A140LIT1 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms