Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm27847-201ENSMUST00000183711 107 ntBASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm27375-201ENSMUST00000183799 107 ntBASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trav6n-6A0A075B6B2 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm18630-201ENSMUST00000222109 1397 ntBASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm29649-201ENSMUST00000185649 419 ntBASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav6n-6A0A075B6B2 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Trav6n-6A0A075B6B2 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav6n-6A0A075B6B2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav6n-6A0A075B6B2 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trav6n-6A0A075B6B2 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav6n-6A0A075B6B2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav6n-6A0A075B6B2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Trav6n-6A0A075B6B2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav6n-6A0A075B6B2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav6n-6A0A075B6B2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trav6n-6A0A075B6B2 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.14□□□□□ -0.95
Trav6n-6A0A075B6B2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms