Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Gm11591-201ENSMUST00000120063 702 ntBASIC10.03□□□□□ -0.8
Trav18A0A075B656 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.03□□□□□ -0.8
Trav18A0A075B656 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Gm6222-202ENSMUST00000182143 629 ntBASIC10.03□□□□□ -0.8
Trav18A0A075B656 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Gm43818-201ENSMUST00000200605 466 ntBASIC10.03□□□□□ -0.8
Trav18A0A075B656 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Gm40466-201ENSMUST00000212174 422 ntBASIC10.03□□□□□ -0.8
Trav18A0A075B656 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Gm45925-201ENSMUST00000218882 744 ntBASIC10.03□□□□□ -0.8
Trav18A0A075B656 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.03□□□□□ -0.8
Trav18A0A075B656 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Trav18A0A075B656 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Trav18A0A075B656 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Trav18A0A075B656 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav18A0A075B656 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav18A0A075B656 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.02□□□□□ -0.8
Trav18A0A075B656 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Trav18A0A075B656 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav18A0A075B656 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav18A0A075B656 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav18A0A075B656 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.02□□□□□ -0.81
Trav18A0A075B656 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.02□□□□□ -0.81
Trav18A0A075B656 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.02□□□□□ -0.81
Trav18A0A075B656 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Gm7809-201ENSMUST00000153199 742 ntBASIC10.02□□□□□ -0.81
Trav18A0A075B656 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.02□□□□□ -0.81
Trav18A0A075B656 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.02□□□□□ -0.81
Trav18A0A075B656 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.02□□□□□ -0.81
Trav18A0A075B656 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.02□□□□□ -0.81
Trav18A0A075B656 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav18A0A075B656 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms