Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.3□□□□□ -0.76
Trav5-4A0A075B652 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Gm24231-201ENSMUST00000104315 133 ntBASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Gm13492-201ENSMUST00000119772 665 ntBASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Gm29127-201ENSMUST00000188304 517 ntBASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Gm40466-201ENSMUST00000212174 422 ntBASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5-4A0A075B652 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Gm12502-201ENSMUST00000120197 444 ntBASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav5-4A0A075B652 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms