Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Trav7n-4A0A075B620 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Gm15544-201ENSMUST00000118776 1531 ntBASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Gm27525-201ENSMUST00000184465 107 ntBASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Itm2b-204ENSMUST00000228637 783 ntBASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Gm24136-201ENSMUST00000083374 165 ntBASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Trav7n-4A0A075B620 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Gm5863-201ENSMUST00000121760 1008 ntBASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Gm24513-201ENSMUST00000174964 138 ntBASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Gm9522-201ENSMUST00000182394 926 ntBASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Gm27397-201ENSMUST00000184997 107 ntBASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Gm6652-201ENSMUST00000186414 1070 ntBASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Gm8099-201ENSMUST00000200510 742 ntBASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 CT943659.1-201ENSMUST00000215459 326 ntBASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Gm7775-201ENSMUST00000218871 853 ntBASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms