Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Gm1335-201ENSMUST00000121653 386 ntBASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Gm42599-201ENSMUST00000201308 469 ntBASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.05□□□□□ -0.64
H2afb3S4R1G7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Gm24136-201ENSMUST00000083374 165 ntBASIC11.05□□□□□ -0.64
H2afb3S4R1G7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
H2afb3S4R1G7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.04□□□□□ -0.64
H2afb3S4R1G7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Gm12502-201ENSMUST00000120197 444 ntBASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Gm9022-201ENSMUST00000182482 992 ntBASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Gm18584-201ENSMUST00000203098 964 ntBASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.04□□□□□ -0.64
H2afb3S4R1G7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.04□□□□□ -0.64
H2afb3S4R1G7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.03□□□□□ -0.64
H2afb3S4R1G7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms