Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ap4s1Q9WVL1 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ap4s1Q9WVL1 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.71□□□□□ -0.54
Ap4s1Q9WVL1 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ap4s1Q9WVL1 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Gm15429-201ENSMUST00000151268 798 ntBASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Gm17208-201ENSMUST00000168388 535 ntBASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Gm9022-201ENSMUST00000182482 992 ntBASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ap4s1Q9WVL1 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Gm12341-201ENSMUST00000119724 503 ntBASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.69□□□□□ -0.54
Ap4s1Q9WVL1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ap4s1Q9WVL1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ap4s1Q9WVL1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms