Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Gm27023-201ENSMUST00000182372 285 ntBASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Clcf1Q9QZM3 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Clcf1Q9QZM3 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Clcf1Q9QZM3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Clcf1Q9QZM3 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Clcf1Q9QZM3 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
Clcf1Q9QZM3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Clcf1Q9QZM3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Clcf1Q9QZM3 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm24830-201ENSMUST00000102024 166 ntBASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm25890-201ENSMUST00000177643 165 ntBASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm22614-201ENSMUST00000178300 165 ntBASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm13097-201ENSMUST00000210722 397 ntBASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm22042-201ENSMUST00000082989 165 ntBASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm26232-201ENSMUST00000083360 166 ntBASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm24136-201ENSMUST00000083374 165 ntBASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm26110-201ENSMUST00000083971 165 ntBASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Clcf1Q9QZM3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Gm13315-201ENSMUST00000120376 991 ntBASIC11.13□□□□□ -0.63
Clcf1Q9QZM3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms