Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Upk3aQ9JKX8 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Upk3aQ9JKX8 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Upk3aQ9JKX8 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.77□□□□□ -0.52
Upk3aQ9JKX8 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.77□□□□□ -0.52
Upk3aQ9JKX8 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Upk3aQ9JKX8 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.77□□□□□ -0.52
Upk3aQ9JKX8 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Upk3aQ9JKX8 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Upk3aQ9JKX8 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.77□□□□□ -0.52
Upk3aQ9JKX8 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Upk3aQ9JKX8 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Gm13665-201ENSMUST00000120830 528 ntBASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Gm25700-201ENSMUST00000177693 110 ntBASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Gm45224-201ENSMUST00000208203 414 ntBASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Upk3aQ9JKX8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Map1b-203ENSMUST00000223725 2669 ntBASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk3aQ9JKX8 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 149.3 ms