Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Gm45597-201ENSMUST00000211524 1994 ntBASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Gm12585-201ENSMUST00000117307 290 ntBASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Gm8000-201ENSMUST00000188378 592 ntBASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Gm38294-201ENSMUST00000192831 381 ntBASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 AW822252-206ENSMUST00000208904 237 ntBASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trem1Q9JKE2 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trem1Q9JKE2 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Trem1Q9JKE2 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trem1Q9JKE2 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trem1Q9JKE2 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trem1Q9JKE2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trem1Q9JKE2 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trem1Q9JKE2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trem1Q9JKE2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trem1Q9JKE2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trem1Q9JKE2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.96□□□□□ -0.66
Trem1Q9JKE2 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trem1Q9JKE2 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Gm43703-201ENSMUST00000200523 763 ntBASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Gm17330-201ENSMUST00000221047 165 ntBASIC10.95□□□□□ -0.66
Trem1Q9JKE2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms