Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Gm4604-201ENSMUST00000025040 390 ntBASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Gm8894-201ENSMUST00000074642 666 ntBASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nkx2-4Q9EQM3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Gm18204-201ENSMUST00000209835 793 ntBASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.54□□□□□ -0.4
Nkx2-4Q9EQM3 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Gm15036-201ENSMUST00000118880 400 ntBASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Gm12783-201ENSMUST00000121425 397 ntBASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Gm18367-201ENSMUST00000176139 600 ntBASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nkx2-4Q9EQM3 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms