Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.8□□□□□ -0.36
Chmp2aQ9DB34 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Gm14726-201ENSMUST00000120623 896 ntBASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Gm20482-202ENSMUST00000174729 825 ntBASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Gm27320-201ENSMUST00000184892 109 ntBASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Gm8712-201ENSMUST00000221090 701 ntBASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chmp2aQ9DB34 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chmp2aQ9DB34 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp2aQ9DB34 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp2aQ9DB34 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp2aQ9DB34 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Chmp2aQ9DB34 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Chmp2aQ9DB34 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2aQ9DB34 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2aQ9DB34 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2aQ9DB34 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Chmp2aQ9DB34 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2aQ9DB34 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2aQ9DB34 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2aQ9DB34 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Chmp2aQ9DB34 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chmp2aQ9DB34 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.77□□□□□ -0.37
Chmp2aQ9DB34 Gm44958-201ENSMUST00000203734 736 ntBASIC12.77□□□□□ -0.37
Chmp2aQ9DB34 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms