Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Auts2-212ENSMUST00000178555 309 ntBASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Gm27892-201ENSMUST00000185017 106 ntBASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Gm37849-201ENSMUST00000194722 1881 ntBASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Gm6007-201ENSMUST00000208170 823 ntBASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Gm6211-201ENSMUST00000147973 4275 ntBASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp5Q9D7S9 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Gm6745-201ENSMUST00000199216 526 ntBASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chmp5Q9D7S9 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Gm45428-201ENSMUST00000209619 1789 ntBASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp5Q9D7S9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms