Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Gm24845-201ENSMUST00000158034 109 ntBASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Gm27501-201ENSMUST00000183599 107 ntBASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Gm42693-201ENSMUST00000196779 631 ntBASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.9□□□□□ -0.34
Ddx56Q9D0R4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ddx56Q9D0R4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Ddx56Q9D0R4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ddx56Q9D0R4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Gm23912-201ENSMUST00000104687 87 ntBASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Gm26956-201ENSMUST00000182176 986 ntBASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx56Q9D0R4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Gm7399-201ENSMUST00000032395 858 ntBASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.88□□□□□ -0.35
Ddx56Q9D0R4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms