Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Mir1938-201ENSMUST00000158746 100 ntBASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Gm42693-201ENSMUST00000196779 631 ntBASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shmt2Q9CZN7 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Gm12502-201ENSMUST00000120197 444 ntBASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Gm8738-201ENSMUST00000172606 329 ntBASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Gm18054-201ENSMUST00000207539 555 ntBASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shmt2Q9CZN7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.71□□□□□ -0.53
Shmt2Q9CZN7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms