Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.62□□□□□ -0.39
Snf8Q9CZ28 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Gm11478-201ENSMUST00000117851 599 ntBASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Gm24644-201ENSMUST00000157114 139 ntBASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snf8Q9CZ28 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Snf8Q9CZ28 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms