Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Gm18711-201ENSMUST00000199341 750 ntBASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Gm18753-201ENSMUST00000201000 566 ntBASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Gm44882-201ENSMUST00000205702 802 ntBASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm7Q9CQQ8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Gm22133-201ENSMUST00000102082 109 ntBASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Gm12266-201ENSMUST00000120311 962 ntBASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Gm43138-201ENSMUST00000199123 708 ntBASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.37□□□□□ -0.43
Lsm7Q9CQQ8 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Rprl1-201ENSMUST00000158050 327 ntBASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Mir3102-201ENSMUST00000175555 104 ntBASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.36□□□□□ -0.43
Lsm7Q9CQQ8 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms