Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm35960-201ENSMUST00000202712 767 ntBASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim11Q99PQ2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Gm23931-201ENSMUST00000103842 109 ntBASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Gm13875-201ENSMUST00000120162 282 ntBASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Gm42937-201ENSMUST00000197360 752 ntBASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Gm43133-201ENSMUST00000197472 463 ntBASIC13.96□□□□□ -0.17
Trim11Q99PQ2 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim11Q99PQ2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim11Q99PQ2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim11Q99PQ2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim11Q99PQ2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trim11Q99PQ2 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim11Q99PQ2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim11Q99PQ2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Gm24934-201ENSMUST00000103764 111 ntBASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.95□□□□□ -0.18
Trim11Q99PQ2 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.95□□□□□ -0.18
Trim11Q99PQ2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim11Q99PQ2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms