Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Gm6222-202ENSMUST00000182143 629 ntBASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Gm22058-201ENSMUST00000083393 310 ntBASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp1b1Q99LU0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Gm6023-201ENSMUST00000118217 606 ntBASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Gm5781-201ENSMUST00000219792 443 ntBASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Gm26035-201ENSMUST00000083065 308 ntBASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Chmp1b1Q99LU0 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Gm3890-201ENSMUST00000182416 207 ntBASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Gm38092-201ENSMUST00000195600 653 ntBASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Gm19184-201ENSMUST00000196798 928 ntBASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.6□□□□□ -0.55
Chmp1b1Q99LU0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms