Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.12□□□□□ -0.15
Rfc4Q99J62 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.12□□□□□ -0.15
Rfc4Q99J62 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.12□□□□□ -0.15
Rfc4Q99J62 Gm16397-201ENSMUST00000122201 494 ntBASIC14.12□□□□□ -0.15
Rfc4Q99J62 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Gm19287-201ENSMUST00000203190 358 ntBASIC14.12□□□□□ -0.15
Rfc4Q99J62 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.12□□□□□ -0.15
Rfc4Q99J62 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.12□□□□□ -0.15
Rfc4Q99J62 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.11□□□□□ -0.15
Rfc4Q99J62 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.11□□□□□ -0.15
Rfc4Q99J62 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.11□□□□□ -0.15
Rfc4Q99J62 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Gm15573-201ENSMUST00000119487 540 ntBASIC14.11□□□□□ -0.15
Rfc4Q99J62 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.11□□□□□ -0.15
Rfc4Q99J62 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.11□□□□□ -0.15
Rfc4Q99J62 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.11□□□□□ -0.15
Rfc4Q99J62 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.11□□□□□ -0.15
Rfc4Q99J62 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.11□□□□□ -0.15
Rfc4Q99J62 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfc4Q99J62 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Gm8199-201ENSMUST00000121323 823 ntBASIC14.1□□□□□ -0.15
Rfc4Q99J62 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.1□□□□□ -0.15
Rfc4Q99J62 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Gm9358-201ENSMUST00000183067 927 ntBASIC14.1□□□□□ -0.15
Rfc4Q99J62 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.1□□□□□ -0.15
Rfc4Q99J62 Gm4607-201ENSMUST00000206649 577 ntBASIC14.1□□□□□ -0.15
Rfc4Q99J62 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC14.1□□□□□ -0.15
Rfc4Q99J62 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.1□□□□□ -0.15
Rfc4Q99J62 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms