Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Gm16112-201ENSMUST00000159075 382 ntBASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Gm2495-201ENSMUST00000191160 466 ntBASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Gm37631-201ENSMUST00000192275 364 ntBASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Gm37215-201ENSMUST00000194927 1259 ntBASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Gm21190-202ENSMUST00000196384 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb3Q91XZ7 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb3Q91XZ7 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Gm6244-201ENSMUST00000178732 841 ntBASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Pcdhb3Q91XZ7 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.44□□□□□ -0.42
Pcdhb3Q91XZ7 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms