Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Mir8109-201ENSMUST00000184375 117 ntBASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Gm21769-201ENSMUST00000211922 111 ntBASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Gm9368-201ENSMUST00000219348 831 ntBASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb6Q91XZ4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhb6Q91XZ4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Pcdhb6Q91XZ4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Pcdhb6Q91XZ4 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Map1b-203ENSMUST00000223725 2669 ntBASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Gm14726-201ENSMUST00000120623 896 ntBASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Gm27516-201ENSMUST00000184237 98 ntBASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb6Q91XZ4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Gm14644-201ENSMUST00000116671 647 ntBASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Gm12015-201ENSMUST00000117065 843 ntBASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Gm2991-201ENSMUST00000173338 480 ntBASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Gm43630-201ENSMUST00000201550 776 ntBASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb6Q91XZ4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb6Q91XZ4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms