Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Gm37259-201ENSMUST00000193903 849 ntBASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Gm7783-201ENSMUST00000204795 781 ntBASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Gm26232-201ENSMUST00000083360 166 ntBASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb11Q91UZ8 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Gm8885-201ENSMUST00000189382 598 ntBASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Gm19994-201ENSMUST00000217086 586 ntBASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pcdhb11Q91UZ8 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Gm3096-201ENSMUST00000185770 364 ntBASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Gm9996-201ENSMUST00000070359 913 ntBASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb11Q91UZ8 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms