Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
StrcQ8VIM6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
StrcQ8VIM6 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.19□□□□□ -0.14
StrcQ8VIM6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Gm15197-201ENSMUST00000120526 478 ntBASIC14.19□□□□□ -0.14
StrcQ8VIM6 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Gm25569-201ENSMUST00000157175 131 ntBASIC14.19□□□□□ -0.14
StrcQ8VIM6 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Gm5267-201ENSMUST00000191574 1045 ntBASIC14.19□□□□□ -0.14
StrcQ8VIM6 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC14.19□□□□□ -0.14
StrcQ8VIM6 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Capsl-202ENSMUST00000226688 739 ntBASIC14.19□□□□□ -0.14
StrcQ8VIM6 Gm5513-201ENSMUST00000072982 1218 ntBASIC14.19□□□□□ -0.14
StrcQ8VIM6 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Gm37600-201ENSMUST00000193764 3292 ntBASIC14.19□□□□□ -0.14
StrcQ8VIM6 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
StrcQ8VIM6 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Gm14005-210ENSMUST00000225087 1413 ntBASIC14.18□□□□□ -0.14
StrcQ8VIM6 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC14.18□□□□□ -0.14
StrcQ8VIM6 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC14.18□□□□□ -0.14
StrcQ8VIM6 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
StrcQ8VIM6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.18□□□□□ -0.14
StrcQ8VIM6 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Gm25830-201ENSMUST00000158923 132 ntBASIC14.18□□□□□ -0.14
StrcQ8VIM6 Gm11942-201ENSMUST00000180255 345 ntBASIC14.18□□□□□ -0.14
StrcQ8VIM6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC14.18□□□□□ -0.14
StrcQ8VIM6 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Gm8181-201ENSMUST00000062242 669 ntBASIC14.18□□□□□ -0.14
StrcQ8VIM6 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
StrcQ8VIM6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
StrcQ8VIM6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
StrcQ8VIM6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
StrcQ8VIM6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
StrcQ8VIM6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.17□□□□□ -0.14
StrcQ8VIM6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
StrcQ8VIM6 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
StrcQ8VIM6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
StrcQ8VIM6 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
StrcQ8VIM6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
StrcQ8VIM6 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
StrcQ8VIM6 Gm25148-201ENSMUST00000104611 123 ntBASIC14.17□□□□□ -0.14
StrcQ8VIM6 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms