Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Mir1982-201ENSMUST00000157368 74 ntBASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Gm24548-201ENSMUST00000158650 108 ntBASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Gm27023-201ENSMUST00000182372 285 ntBASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Gm37008-201ENSMUST00000195712 319 ntBASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Gm8227-201ENSMUST00000223306 571 ntBASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Gm10076-201ENSMUST00000073238 384 ntBASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
H1fooQ8VIK3 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
H1fooQ8VIK3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
H1fooQ8VIK3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
H1fooQ8VIK3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
H1fooQ8VIK3 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
H1fooQ8VIK3 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.27□□□□□ -0.76
H1fooQ8VIK3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
H1fooQ8VIK3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
H1fooQ8VIK3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
H1fooQ8VIK3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.27□□□□□ -0.76
H1fooQ8VIK3 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.76
H1fooQ8VIK3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Gm6023-201ENSMUST00000118217 606 ntBASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Gm13342-201ENSMUST00000121055 207 ntBASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
H1fooQ8VIK3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Gm23119-201ENSMUST00000158610 140 ntBASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Gm43433-201ENSMUST00000196573 481 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms